Galaxy portal
Galaxy is an open platform for supporting data-intensive research focusing on biomedical, chemical, and general data analyses, including statistics, machine learning, and visualization tools. The analyses can be performed using a graphical environment and hence could be easily used by non-bioinformaticians. The RTU Galaxy instance is connected to the HPC cluster and serves as a web-based GUI to submit analyses to the cluster.
The Galaxy interface is shown in the following figure. It is an example output of the sequencing quality control tool FastQC.
Access
RTU HPC Galaxy instance is available here: https://galaxy.hpc.rtu.lv.
Access to this galaxy can be requested by sending an email to hpc@rtu.lv. You should be able to auto-register also with your RTU HPC cluster credentials. Any requests regarding tools or reference datasets can be sent to support e-mail as well.